Nuts and Bolts

These pages are meant to share our experience with various tools and topics related to bioinformatics. Don't expect formal documentation; the idea is that we'll post quickly here to share tips and "quick start" directions with each other, then gradually touch up these pages as we gain deeper experience with each topic.

Data Analysis

System Administration

Web Application Development

NextGenCourse

Bioinformatics Core Pages / Tools:

• Rediscovery DB User Documentation
• Binbase + SetupX
• Bioshare File Structure
• Bioshare REST API
• SLIMS package
• Using the CMGI web interface for Administrators
• Using the CMGI web interface for Users
• Often used file locations
• Symap Workflow
• InterProScan
• Sanger Read Assembly